data science

Open-source data science application

StatsPro: A Statistical Tool for Detecting Differential Expression in Label-Free Quantitative Proteomics

Statistics

StatsPro: A Statistical Tool for Detecting Differential Expression in Label-Free Quantitative Proteomics

StatsPro is a comprehensive tool designed to help scientists detect differentially expressed proteins in label-free quantitative proteomics experiments. The tool integrates 12 common statistical methods and 6 P-value combination strategies, allowing users to systematically evaluate the performance of these methods. By offering three evaluation criteria, StatsPro provides a detailed and

By Hazem Abbas
Revolutionizing Healthcare: The Impact of Python in Bioinformatics, Medicine, and AI Integration, 18 Libraries and Projects

BioInformatics

Revolutionizing Healthcare: The Impact of Python in Bioinformatics, Medicine, and AI Integration, 18 Libraries and Projects

The Python programming language plays a significant role in data science, AI, bioinformatics, web development, desktop applications, and game development. Python has gained popularity as an easy-to-learn language with a gentle learning curve and powerful frameworks. This has made it a favorite for university student projects and a common first

By Hazem Abbas
Introducing Ascle: A State-of-the-Art Framework for Efficient Natural Language Processing for Medical Text Generation

BioInformatics

Introducing Ascle: A State-of-the-Art Framework for Efficient Natural Language Processing for Medical Text Generation

As Natural Language Processing (NLP) evolves, researchers and developers continually seek new frameworks to boost efficiency, speed, and performance. Ascle, an innovative NLP framework developed by Yale LILY (Language, Information, and Learning at Yale), stands out as one of the most promising new entries in this field. This Free open-source

By Hazem Abbas
EHrapy: The Ultimate Open-Source Tool for Simplifying Healthcare Data and Medical Records Analysis

EMR

EHrapy: The Ultimate Open-Source Tool for Simplifying Healthcare Data and Medical Records Analysis

Healthcare researchers and data scientists often grapple with processing vast amounts of complex, sensitive Electronic Health Records (EHR) data. EHrapy, an open-source Python package developed by TheisLab, tackles these challenges head-on. It streamlines the handling, analysis, and exploration of healthcare data—especially EHR data—in a privacy-preserving and user-friendly manner.

By Hazem Abbas
18 Free and Open-source Whole Slide Imaging Pathology Projects and Libraries, a Comprehensive Guide for Bioengineers and Bio Data Scientists (2024)

Pathology

18 Free and Open-source Whole Slide Imaging Pathology Projects and Libraries, a Comprehensive Guide for Bioengineers and Bio Data Scientists (2024)

Digital pathology is a cutting-edge field that transforms traditional pathology by digitizing glass slides into high-resolution whole slide images (WSIs). These WSIs capture the entire tissue sample on a slide, enabling detailed analysis and diagnostics through digital means. By using advanced imaging techniques, digital pathology allows pathologists to view, analyze,

By Hazem Abbas